Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent105 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319005 bp
Thymine Count
1320814 bp
Guanine Count
1360207 bp
Cytosine Count
1332644 bp
Genome Length
5332838 bp
Protein-coding Genes
4756 genes
Non-Coding Genes
465 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY24_16160 | Not Available | Positive | 3166319 - 3167104 | 29469.2 |
| hcp family type vi secretion system effector | EYY24_16165 | Not Available | Negative | 3167444 - 3167923 | 17511.6 |
| hypothetical protein | EYY24_16170 | Not Available | Negative | 3167941 - 3169299 | 51754.5 |
| type vi secretion system membrane subunit tssm | EYY24_16175 | Not Available | Negative | 3169310 - 3172777 | 132264.0 |
| type vi secretion system protein tssa | EYY24_16180 | Not Available | Negative | 3172857 - 3174299 | 53880.1 |
| type vi secretion system atpase tssh | EYY24_16190 | Not Available | Negative | 3175061 - 3177820 | 100201.0 |
| dotu family type iv/vi secretion system protein | EYY24_16195 | Not Available | Negative | 3177830 - 3178594 | 29417.9 |
| type vi secretion system baseplate subunit tssk | EYY24_16200 | Not Available | Negative | 3178599 - 3179945 | 49894.3 |
| type vi secretion system lipoprotein tssj | EYY24_16205 | Not Available | Negative | 3179948 - 3180472 | 19252.9 |
| type vi secretion system-associated fha domain protein tagh | EYY24_16210 | Not Available | Negative | 3180469 - 3181761 | 47663.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





