Escherichia coli strain Broiler parent103

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent103 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, thriving optimally at 37°C within a mesophilic temperature range. This strain is motile and possesses flagella, allowing for mobility in its host-associated habitat. It is characterized by a biotic relationship that is free-living, indicating its capacity to survive outside of a host environment. E. coli strain Broiler parent103 has a diverse range of hosts, including Homo sapiens, various livestock such as Gallus gallus (chickens) and Bos taurus (cattle), as well as a variety of other animals and even certain plants like Solanum lycopersicum (tomato) and Brassica oleracea var. italica (broccoli). This broad host range highlights the strain's ecological versatility and its role in various biological interactions. Clinically, this strain is significant due to its association with numerous health effects, including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as hemolytic uremic syndrome (HUS) and neonatal meningitis. The ability of E. coli strain Broiler parent103 to cause a spectrum of diseases underscores its pathogenic potential, particularly in humans, where it can lead to serious health complications. The ecological insight provided by the host diversity and pathogenicity of this strain suggests that E. coli strain Broiler parent103 plays a complex role in both the environment and human health, serving as an important indicator of microbial interactions within various ecosystems and the potential for zoonotic transmission of pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent103

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent103
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent103

Gene Summary

Adenine Count

1218016 bp

Thymine Count

1220869 bp

Guanine Count

1256828 bp

Cytosine Count

1230654 bp

Genome Length

4926459 bp

Protein-coding Genes

4421 genes

Non-Coding Genes

430 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
proline--trna ligaseEYY22_10125Not AvailablePositive2012645 - 201436363626.2
yaef family permuted papain-like enzymeEYY22_10130Not AvailablePositive2014416 - 201524029845.8
envelope stress response activation lipoprotein nlpeEYY22_10135Not AvailableNegative2015440 - 201615025841.7
aminoacyl-trna hydrolaseEYY22_10140Not AvailableNegative2016164 - 201658615559.8
yaeq family proteinEYY22_10145Not AvailableNegative2016583 - 201712820877.7
yaep family proteinEYY22_10150Not AvailablePositive2017294 - 20174947214.59
rho-binding antiterminatorEYY22_10155Not AvailablePositive2017481 - 20177419698.45
trna lysidine(34) synthetase tilsEYY22_10160Not AvailableNegative2017790 - 201908848160.9
voc family proteinEYY22_10165Not AvailableNegative2019153 - 201954214735.5
lysine decarboxylase ldccEYY22_10170Not AvailableNegative2019599 - 202174080608.9

Displaying genes 2301 – 2310 of 4851 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total