Escherichia coli strain Broiler parent95

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent95 is a Gram-negative, rod-shaped bacterium with a facultative anaerobic oxygen requirement, capable of mobility due to the presence of flagella. Its optimal growth temperature is 37°C, placing it within the mesophilic temperature range. This strain is characterized by a single replicon and possesses two membranes, indicating its complexity as a prokaryotic organism. E. coli Broiler parent95 is associated with a diverse array of hosts, including Homo sapiens (humans), various livestock such as Gallus gallus (chickens), Bos taurus (cattle), and Sus scrofa (pigs), as well as numerous other vertebrates and invertebrates. This free-living bacterium can inhabit multiple ecological niches, reflecting its adaptability and potential for interaction with different species. Health effects attributed to E. coli strain Broiler parent95 are significant, particularly in humans. It is associated with a range of serious conditions, including urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis, among others. The strain is known to cause diseases that can lead to severe outcomes such as hemolytic uremic syndrome (HUS) and colorectal cancer. The broad host range and pathogenic potential of E. coli Broiler parent95 underscore its ecological and biological importance. Its interaction with both agricultural and wild species illustrates the role of this bacterium in health and disease dynamics, highlighting the need for ongoing surveillance and research into its epidemiology and impact on public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent95

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent95
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent95

Gene Summary

Adenine Count

1435050 bp

Thymine Count

1437273 bp

Guanine Count

1453825 bp

Cytosine Count

1468966 bp

Genome Length

5795243 bp

Protein-coding Genes

5297 genes

Non-Coding Genes

390 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Baseplate assembly protein vEYY14_03010Not AvailableNegative566401 - 56698220286.1
Tail proteinEYY14_03015Not AvailableNegative566979 - 56759323572.6
Tail proteinEYY14_03020Not AvailableNegative567651 - 56811517743.1
PeptidaseEYY14_03025Not AvailableNegative568102 - 5682816687.82
Hypothetical proteinEYY14_03030Not AvailableNegative568651 - 56919620205.1
AttlNot AvailableNot AvailablePositive2407876 - 2407888Not Available
N-acyltransferaseEYY14_12795Not AvailablePositive2421847 - 242229316594.7
Hypothetical proteinEYY14_12800Not AvailablePositive2422308 - 242298525278.9
peptide chain release factor 3EYY14_12805Not AvailablePositive2423049 - 24231503885.75
Phage integraseEYY14_12810Not AvailablePositive2423371 - 242460647627.4

Displaying genes 11 – 20 of 5687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total