Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1225499 bp
Thymine Count
1225066 bp
Guanine Count
1243328 bp
Cytosine Count
1245046 bp
Genome Length
4939038 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
286 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnfh family protein | EYY13_01255 | Not Available | Negative | 252929 - 253219 | 10816.1 |
| type ii toxin-antitoxin system toxin rata | EYY13_01260 | Not Available | Negative | 253209 - 253685 | 17686.6 |
| ssra-binding protein smpb | EYY13_01265 | Not Available | Positive | 253817 - 254299 | 18270.1 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 254514 - 254876 | Not Available |
| carbon starvation induced protein csid | EYY13_01280 | Not Available | Positive | 255560 - 256537 | 37319.6 |
| l-2-hydroxyglutarate oxidase | EYY13_01285 | Not Available | Positive | 256557 - 257825 | 46078.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase | EYY13_01290 | Not Available | Positive | 257848 - 259296 | 51836.2 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EYY13_01295 | Not Available | Positive | 259310 - 260590 | 45688.4 |
| gaba permease | EYY13_01300 | Not Available | Positive | 260827 - 262227 | 51145.2 |
| dna-binding transcriptional regulator csir | EYY13_01305 | Not Available | Positive | 262248 - 262910 | 25018.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





