Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1225499 bp
Thymine Count
1225066 bp
Guanine Count
1243328 bp
Cytosine Count
1245046 bp
Genome Length
4939038 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
286 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY13_19475 | Not Available | Positive | 3908006 - 3908203 | 7714.29 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | EYY13_19480 | Not Available | Positive | 3908124 - 3909560 | 53678.6 |
| cytochrome c nitrite reductase pentaheme subunit | EYY13_19485 | Not Available | Positive | 3909605 - 3910171 | 20642.6 |
| cytochrome c nitrite reductase fe-s protein | EYY13_19490 | Not Available | Positive | 3910168 - 3910839 | 24591.8 |
| cytochrome c nitrite reductase subunit nrfd | EYY13_19495 | Not Available | Positive | 3910836 - 3911792 | 35053.4 |
| heme lyase ccmf/nrfe family subunit | EYY13_19500 | Not Available | Positive | 3911812 - 3913530 | 63553.0 |
| heme lyase nrfefg subunit nrff | EYY13_19505 | Not Available | Positive | 3913523 - 3913906 | 14589.0 |
| heme lyase nrfefg subunit nrfg | EYY13_19510 | Not Available | Positive | 3913903 - 3914499 | 22829.6 |
| glutamate/aspartate:proton symporter gltp | EYY13_19515 | Not Available | Positive | 3914842 - 3916155 | 47166.1 |
| sel1 repeat family protein | EYY13_19520 | Not Available | Negative | 3916236 - 3916925 | 25110.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





