Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1225499 bp
Thymine Count
1225066 bp
Guanine Count
1243328 bp
Cytosine Count
1245046 bp
Genome Length
4939038 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
286 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haaap family serine/threonine permease | EYY13_18180 | Not Available | Negative | 3646613 - 3647944 | 48331.6 |
| l-serine ammonia-lyase | EYY13_18185 | Not Available | Negative | 3648223 - 3649587 | 48508.6 |
| enamine/imine deaminase | EYY13_18190 | Not Available | Negative | 3649659 - 3650048 | 14008.0 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | EYY13_18195 | Not Available | Negative | 3650062 - 3652356 | 85992.5 |
| propionate kinase | EYY13_18200 | Not Available | Negative | 3652390 - 3653598 | 43396.7 |
| threonine/serine transporter tdcc | EYY13_18205 | Not Available | Negative | 3653624 - 3654955 | 48895.8 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | EYY13_18210 | Not Available | Negative | 3654977 - 3655966 | 35234.5 |
| transcriptional regulator tdca | EYY13_18215 | Not Available | Negative | 3656065 - 3657003 | 34598.9 |
| dna-binding transcriptional activator tdcr | EYY13_18220 | Not Available | Positive | 3657192 - 3657536 | 13478.3 |
| glycerate 2-kinase | EYY13_18230 | Not Available | Negative | 3658510 - 3659655 | 39030.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





