Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1225499 bp
Thymine Count
1225066 bp
Guanine Count
1243328 bp
Cytosine Count
1245046 bp
Genome Length
4939038 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
286 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni/fe-hydrogenase cytochrome b subunit | EYY13_17565 | Not Available | Negative | 3517378 - 3518556 | 43604.7 |
| hydrogenase 2 operon protein hyba | EYY13_17570 | Not Available | Negative | 3518546 - 3519532 | 36014.0 |
| hydrogenase 2 small subunit | EYY13_17575 | Not Available | Negative | 3519535 - 3520653 | 39654.3 |
| duf2623 domain-containing protein | EYY13_17580 | Not Available | Negative | 3520842 - 3521129 | 10946.1 |
| dienelactone hydrolase family protein | EYY13_17585 | Not Available | Negative | 3521248 - 3522135 | 32668.8 |
| l-glyceraldehyde 3-phosphate reductase | EYY13_17590 | Not Available | Positive | 3522293 - 3523333 | 38851.3 |
| tigr00645 family protein | EYY13_17595 | Not Available | Negative | 3523373 - 3523867 | 18642.3 |
| nadp(+)-dependent aldehyde reductase | EYY13_17600 | Not Available | Positive | 3524058 - 3524942 | 31503.8 |
| tonb system transport protein exbd | EYY13_17605 | Not Available | Negative | 3524981 - 3525406 | 15527.9 |
| biopolymer transporter exbb | EYY13_17610 | Not Available | Negative | 3525413 - 3526147 | 26289.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





