Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1225499 bp
Thymine Count
1225066 bp
Guanine Count
1243328 bp
Cytosine Count
1245046 bp
Genome Length
4939038 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
286 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspk | EYY13_17360 | Not Available | Negative | 3471534 - 3472511 | 36482.2 |
| type ii secretion system protein gspj | EYY13_17365 | Not Available | Negative | 3472508 - 3473113 | 22320.3 |
| type ii secretion system protein gspi | EYY13_17370 | Not Available | Negative | 3473110 - 3473481 | 13652.3 |
| type ii secretion system protein gsph | EYY13_17375 | Not Available | Negative | 3473478 - 3474041 | 21272.9 |
| type ii secretion system protein gspg | EYY13_17380 | Not Available | Negative | 3474045 - 3474500 | 16663.8 |
| type ii secretion system protein gspf | EYY13_17385 | Not Available | Negative | 3474517 - 3475740 | 44910.8 |
| type ii secretion system protein gspe | EYY13_17390 | Not Available | Negative | 3475740 - 3477233 | 55211.8 |
| type ii secretion system protein gspd | EYY13_17395 | Not Available | Negative | 3477233 - 3479293 | 74199.2 |
| type ii secretion system protein gspc | EYY13_17400 | Not Available | Negative | 3479323 - 3480282 | 35682.2 |
| hypothetical protein | EYY13_17405 | Not Available | Negative | 3480300 - 3480710 | 14686.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





