Escherichia coli strain Broiler parent94

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent94 is a Gram-negative, rod-shaped bacterium that displays a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is characterized by its mobility, attributed to the presence of flagella, and it typically exists in pairs or as single cells. The optimal growth temperature for Broiler parent94 is 37°C, classifying it as mesophilic. This strain is host-associated and exhibits a free-living biotic relationship. It has a diverse range of hosts, including Homo sapiens, various livestock such as Gallus gallus (chickens), Bos taurus (cattle), and numerous other vertebrates and invertebrates. Such a broad host range indicates its ecological versatility and adaptability. E. coli strain Broiler parent94 is associated with numerous health effects, particularly in humans and other animals. It is known to cause urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain's pathogenicity is significant in both clinical and agricultural settings, leading to foodborne infections and complications in livestock. The presence of E. coli in diverse habitats and its ability to cause a wide range of health issues underscore its importance in microbiology and public health. Understanding the ecology and pathogenic mechanisms of strains like Broiler parent94 can inform preventive measures and treatment strategies for the infections they cause, illustrating the complex interactions between microbial life and host health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent94

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent94
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent94

Gene Summary

Adenine Count

1225499 bp

Thymine Count

1225066 bp

Guanine Count

1243328 bp

Cytosine Count

1245046 bp

Genome Length

4939038 bp

Protein-coding Genes

4496 genes

Non-Coding Genes

286 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
poly-alpha-2,8 sialosyl sialyltransferaseEYY13_17310Not AvailableNegative3460835 - 346206447517.4
neue proteinEYY13_17315Not AvailableNegative3462054 - 346320244859.2
udp-n-acetylglucosamine 2-epimerase (hydrolyzing)EYY13_17320Not AvailableNegative3463195 - 346437044241.2
acylneuraminate cytidylyltransferaseEYY13_17325Not AvailableNegative3464367 - 346562348650.0
n-acetylneuraminate synthaseEYY13_17330Not AvailableNegative3465623 - 346666338743.7
acetyltransferaseEYY13_17335Not AvailableNegative3466660 - 346728322687.6
abc transporter atp-binding proteinEYY13_17340Not AvailableNegative3467333 - 346799224940.1
polysialic acid transporter kpsmEYY13_17345Not AvailableNegative3467989 - 346876529559.4
type ii secretion system proteinEYY13_17350Not AvailableNegative3469821 - 347035720335.6
type ii secretion system protein gsplEYY13_17355Not AvailableNegative3470359 - 347153744316.6

Displaying genes 3471 – 3480 of 4782 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total