Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1225499 bp
Thymine Count
1225066 bp
Guanine Count
1243328 bp
Cytosine Count
1245046 bp
Genome Length
4939038 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
286 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase molybdenum-binding subunit xdha | EYY13_16745 | Not Available | Positive | 3341804 - 3344101 | 82647.9 |
| xanthine dehydrogenase fad-binding subunit xdhb | EYY13_16750 | Not Available | Positive | 3344112 - 3344990 | 31528.6 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | EYY13_16755 | Not Available | Positive | 3344987 - 3345466 | 16891.8 |
| sigma-54-dependent transcriptional regulator | EYY13_16760 | Not Available | Negative | 3345505 - 3347283 | 66028.9 |
| knotted carbamoyltransferase ygew | EYY13_16765 | Not Available | Positive | 3347762 - 3348949 | 44058.7 |
| diaminopropionate ammonia-lyase | EYY13_16770 | Not Available | Positive | 3349007 - 3350203 | 43311.0 |
| ygey family selenium metabolism-linked hydrolase | EYY13_16775 | Not Available | Positive | 3350261 - 3351472 | 44806.4 |
| dihydropyrimidinase | EYY13_16780 | Not Available | Positive | 3351525 - 3352910 | 50905.0 |
| carbamate kinase | EYY13_16785 | Not Available | Positive | 3352958 - 3353890 | 33058.0 |
| ef2563 family selenium-dependent molybdenum hydroxylase system protein | EYY13_16790 | Not Available | Negative | 3353931 - 3355556 | 57696.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





