Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1225499 bp
Thymine Count
1225066 bp
Guanine Count
1243328 bp
Cytosine Count
1245046 bp
Genome Length
4939038 bp
Protein-coding Genes
4496 genes
Non-Coding Genes
286 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY13_16695 | Not Available | Negative | 3334084 - 3334446 | 12828.2 |
| hypothetical protein | EYY13_16700 | Not Available | Negative | 3334443 - 3334655 | 8097.9 |
| hypothetical protein | EYY13_16705 | Not Available | Positive | 3334768 - 3335635 | 31677.9 |
| hypothetical protein | EYY13_16710 | Not Available | Positive | 3335636 - 3336514 | 32300.1 |
| type vi secretion system tip protein vgrg | EYY13_16715 | Not Available | Positive | 3337327 - 3338131 | 30269.1 |
| helix-turn-helix domain-containing protein | EYY13_16720 | Not Available | Negative | 3338132 - 3338606 | 17755.0 |
| recombinase family protein | EYY13_16725 | Not Available | Positive | 3338930 - 3339180 | 9009.96 |
| hypothetical protein | EYY13_16730 | Not Available | Negative | 3339641 - 3339940 | 11400.8 |
| Trna-gly | Not Available | Not Available | Positive | 3340483 - 3340556 | Not Available |
| lysm peptidoglycan-binding domain-containing protein | EYY13_16740 | Not Available | Negative | 3340635 - 3341390 | 26540.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





