Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent92 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1177434 bp
Thymine Count
1173316 bp
Guanine Count
1212167 bp
Cytosine Count
1211977 bp
Genome Length
4775070 bp
Protein-coding Genes
4352 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination factor nusb | EYY11_19335 | Not Available | Negative | 3816960 - 3817379 | 15689.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | EYY11_19340 | Not Available | Negative | 3817399 - 3817869 | 16157.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EYY11_19345 | Not Available | Negative | 3817958 - 3819061 | 40340.7 |
| transcriptional regulator nrdr | EYY11_19350 | Not Available | Negative | 3819065 - 3819514 | 17229.9 |
| duf3251 domain-containing protein | EYY11_19355 | Not Available | Positive | 3819665 - 3820204 | 19561.5 |
| nucleoside-specific channel-forming protein tsx | EYY11_19360 | Not Available | Positive | 3820503 - 3821387 | 33590.6 |
| hnh nuclease family protein | EYY11_19365 | Not Available | Negative | 3821564 - 3821911 | 13364.7 |
| protein translocase subunit secf | EYY11_19370 | Not Available | Negative | 3822040 - 3823011 | 35384.6 |
| protein translocase subunit secd | EYY11_19375 | Not Available | Negative | 3823022 - 3824869 | 66636.3 |
| preprotein translocase subunit yajc | EYY11_19380 | Not Available | Negative | 3824897 - 3825229 | 11887.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





