Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent92 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1177434 bp
Thymine Count
1173316 bp
Guanine Count
1212167 bp
Cytosine Count
1211977 bp
Genome Length
4775070 bp
Protein-coding Genes
4352 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath small subunit | EYY11_15855 | Not Available | Negative | 3135519 - 3136019 | 18052.4 |
| hcp family type vi secretion system effector | EYY11_15860 | Not Available | Positive | 3136714 - 3137232 | 19256.8 |
| type vi secretion protein | EYY11_15865 | Not Available | Positive | 3137442 - 3137834 | 14902.9 |
| type vi secretion system tip protein vgrg | EYY11_15870 | Not Available | Positive | 3137844 - 3139583 | 64374.6 |
| rhs repeat protein | EYY11_15875 | Not Available | Positive | 3139659 - 3143903 | 158925.0 |
| hypothetical protein | EYY11_15880 | Not Available | Negative | 3144054 - 3144243 | 6064.28 |
| nickel-responsive transcriptional regulator nikr | EYY11_15885 | Not Available | Negative | 3144446 - 3144847 | 15094.7 |
| nickel import atp-binding protein nike | EYY11_15890 | Not Available | Negative | 3144853 - 3145659 | 29723.5 |
| nickel import atp-binding protein nikd | EYY11_15895 | Not Available | Negative | 3145656 - 3146420 | 26822.1 |
| nickel abc transporter permease subunit nikc | EYY11_15900 | Not Available | Negative | 3146420 - 3147253 | 30363.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





