Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent92 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1177434 bp
Thymine Count
1173316 bp
Guanine Count
1212167 bp
Cytosine Count
1211977 bp
Genome Length
4775070 bp
Protein-coding Genes
4352 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | EYY11_15805 | Not Available | Negative | 3123714 - 3126479 | 100993.0 |
| dotu family type iv/vi secretion system protein | EYY11_15810 | Not Available | Negative | 3126488 - 3127249 | 29350.7 |
| type vi secretion system baseplate subunit tssk | EYY11_15815 | Not Available | Negative | 3127254 - 3128585 | 49909.7 |
| type vi secretion system lipoprotein tssj | EYY11_15820 | Not Available | Negative | 3128588 - 3129112 | 19395.0 |
| type vi secretion system-associated fha domain protein tagh | EYY11_15825 | Not Available | Negative | 3129109 - 3130389 | 47386.8 |
| type vi secretion system baseplate subunit tssg | EYY11_15830 | Not Available | Negative | 3130414 - 3131496 | 40262.1 |
| type vi secretion system baseplate subunit tssf | EYY11_15835 | Not Available | Negative | 3131460 - 3133310 | 71190.0 |
| type vi secretion system baseplate subunit tsse | EYY11_15840 | Not Available | Negative | 3133314 - 3133727 | 15478.0 |
| type vi secretion system contractile sheath large subunit | EYY11_15845 | Not Available | Negative | 3133734 - 3135209 | 55733.1 |
| hypothetical protein | EYY11_15850 | Not Available | Negative | 3135260 - 3135484 | 8411.01 |
Pathways
370 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





