Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent92 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1177434 bp
Thymine Count
1173316 bp
Guanine Count
1212167 bp
Cytosine Count
1211977 bp
Genome Length
4775070 bp
Protein-coding Genes
4352 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit hyfc | EYY11_14365 | Not Available | Negative | 2862232 - 2863179 | 34387.4 |
| hydrogenase 4 subunit hyfa | EYY11_14375 | Not Available | Negative | 2865207 - 2865824 | 22252.7 |
| thioredoxin-dependent thiol peroxidase | EYY11_14380 | Not Available | Negative | 2866077 - 2866547 | 17634.9 |
| glycine cleavage system transcriptional repressor | EYY11_14385 | Not Available | Negative | 2866547 - 2867119 | 20769.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EYY11_14390 | Not Available | Positive | 2867265 - 2868143 | 31271.8 |
| outer membrane protein assembly factor bamc | EYY11_14395 | Not Available | Positive | 2868160 - 2869194 | 36844.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | EYY11_14400 | Not Available | Positive | 2869407 - 2870120 | 26996.5 |
| neutral zinc metallopeptidase | EYY11_14405 | Not Available | Positive | 2870288 - 2871151 | 31462.0 |
| trna cytosine(34) acetyltransferase tmca | EYY11_14410 | Not Available | Positive | 2871166 - 2873181 | 74896.7 |
| esterase | EYY11_14415 | Not Available | Positive | 2873255 - 2873953 | 24856.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





