Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent92 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1177434 bp
Thymine Count
1173316 bp
Guanine Count
1212167 bp
Cytosine Count
1211977 bp
Genome Length
4775070 bp
Protein-coding Genes
4352 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate transporter | EYY11_14100 | Not Available | Negative | 2811816 - 2813156 | 47938.2 |
| two-component system response regulator dcur | EYY11_14105 | Not Available | Negative | 2813727 - 2814446 | 27489.9 |
| two-component system sensor histidine kinase dcus | EYY11_14110 | Not Available | Negative | 2814443 - 2816074 | 60554.4 |
| 4fe-4s mono-cluster protein yjdi | EYY11_14115 | Not Available | Positive | 2816255 - 2816485 | 8550.35 |
| n-acetyltransferase | EYY11_14120 | Not Available | Positive | 2816497 - 2816769 | 10468.7 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | EYY11_14125 | Not Available | Positive | 2816996 - 2817271 | 10301.2 |
| hypothetical protein | EYY11_14130 | Not Available | Positive | 2817300 - 2817351 | 1628.92 |
| is1 family transposase | EYY11_14135 | Not Available | Negative | 2817352 - 2817448 | 3441.09 |
| glucuronide uptake porin uidc | EYY11_14145 | Not Available | Positive | 2818759 - 2820024 | 46656.2 |
| duf945 domain-containing protein | EYY11_14150 | Not Available | Negative | 2820250 - 2821758 | 54706.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





