Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent92 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1177434 bp
Thymine Count
1173316 bp
Guanine Count
1212167 bp
Cytosine Count
1211977 bp
Genome Length
4775070 bp
Protein-coding Genes
4352 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system mating-pair stabilization protein tran | EYY11_13520 | Not Available | Positive | 2686972 - 2688780 | 65719.2 |
| conjugal transfer protein trbe | EYY11_13525 | Not Available | Positive | 2688807 - 2689064 | 9809.94 |
| type-f conjugative transfer system pilin assembly protein traf | EYY11_13530 | Not Available | Positive | 2689057 - 2689800 | 28042.7 |
| conjugal transfer protein trba | EYY11_13535 | Not Available | Positive | 2689816 - 2690163 | 12962.6 |
| type-f conjugative transfer system pilin chaperone traq | EYY11_13540 | Not Available | Positive | 2690282 - 2690566 | 10965.5 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | EYY11_13545 | Not Available | Positive | 2690553 - 2691098 | 19786.0 |
| p-type conjugative transfer protein trbj | EYY11_13550 | Not Available | Positive | 2691028 - 2691390 | 13344.6 |
| conjugal transfer protein trah | EYY11_13555 | Not Available | Positive | 2691387 - 2692763 | 50425.5 |
| conjugal transfer protein trag | EYY11_13560 | Not Available | Positive | 2692760 - 2695582 | 102663.0 |
| surface exclusion protein | EYY11_13565 | Not Available | Positive | 2695603 - 2696100 | 19128.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





