Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent92 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1177434 bp
Thymine Count
1173316 bp
Guanine Count
1212167 bp
Cytosine Count
1211977 bp
Genome Length
4775070 bp
Protein-coding Genes
4352 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock protein ydfk | EYY11_12255 | Not Available | Positive | 2457125 - 2457358 | 8778.78 |
| recombinase family protein | EYY11_12260 | Not Available | Positive | 2457675 - 2458265 | 21921.8 |
| tail fiber assembly protein | EYY11_12265 | Not Available | Negative | 2458363 - 2458482 | 4570.51 |
| Trna-thr | Not Available | Not Available | Positive | 2458702 - 2458777 | Not Available |
| amino acid abc transporter atp-binding protein | EYY11_12290 | Not Available | Negative | 2459163 - 2459921 | 28575.9 |
| amino acid abc transporter permease | EYY11_12295 | Not Available | Negative | 2459929 - 2461032 | 41486.7 |
| amino acid abc transporter permease | EYY11_12300 | Not Available | Negative | 2461042 - 2462223 | 43263.9 |
| amino acid abc transporter substrate-binding protein | EYY11_12305 | Not Available | Negative | 2462291 - 2463316 | 37048.9 |
| hypothetical protein | EYY11_12310 | Not Available | Negative | 2463747 - 2463968 | 7452.14 |
| multidrug efflux rnd transporter permease subunit acrf | EYY11_12315 | Not Available | Negative | 2464221 - 2467310 | 110854.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





