Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent92 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1177434 bp
Thymine Count
1173316 bp
Guanine Count
1212167 bp
Cytosine Count
1211977 bp
Genome Length
4775070 bp
Protein-coding Genes
4352 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | EYY11_12105 | Not Available | Positive | 2429841 - 2430131 | 11255.4 |
| trans-aconitate 2-methyltransferase | EYY11_12110 | Not Available | Positive | 2430188 - 2430946 | 29007.5 |
| hypothetical protein | EYY11_12115 | Not Available | Negative | 2430950 - 2431864 | 34810.0 |
| tagaturonate reductase | EYY11_12120 | Not Available | Negative | 2432071 - 2433522 | 54855.3 |
| diguanylate cyclase | EYY11_12125 | Not Available | Negative | 2433749 - 2435167 | 52200.5 |
| duf4186 domain-containing protein | EYY11_12130 | Not Available | Negative | 2435306 - 2435665 | 13544.5 |
| glutaminase 2 | EYY11_12135 | Not Available | Negative | 2435665 - 2436591 | 33517.6 |
| succinate-semialdehyde dehydrogenase | EYY11_12140 | Not Available | Negative | 2436655 - 2438043 | 49720.7 |
| lysr family transcriptional regulator | EYY11_12145 | Not Available | Positive | 2438144 - 2439025 | 32484.9 |
| putative protein ynek | EYY11_12150 | Not Available | Positive | 2439103 - 2440218 | 42859.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





