Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent92 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1177434 bp
Thymine Count
1173316 bp
Guanine Count
1212167 bp
Cytosine Count
1211977 bp
Genome Length
4775070 bp
Protein-coding Genes
4352 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system serine/threonine protein kinase toxin hipa | EYY11_12050 | Not Available | Negative | 2413696 - 2415018 | 49278.6 |
| type ii toxin-antitoxin system antitoxin hipb | EYY11_12055 | Not Available | Negative | 2415018 - 2415284 | 10016.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | EYY11_12060 | Not Available | Negative | 2415507 - 2416907 | 50541.7 |
| autoinducer-2 kinase | EYY11_12070 | Not Available | Negative | 2421459 - 2423051 | 57562.0 |
| transcriptional regulator lsrr | EYY11_12075 | Not Available | Negative | 2423130 - 2424083 | 33828.0 |
| autoinducer 2 abc transporter atp-binding protein lsra | EYY11_12080 | Not Available | Positive | 2424332 - 2425867 | 55600.5 |
| autoinducer 2 abc transporter permease lsrc | EYY11_12085 | Not Available | Positive | 2425861 - 2426889 | 36334.0 |
| autoinducer 2 abc transporter permease lsrd | EYY11_12090 | Not Available | Positive | 2426889 - 2427881 | 34486.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | EYY11_12095 | Not Available | Positive | 2427893 - 2428915 | 36714.9 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | EYY11_12100 | Not Available | Positive | 2428942 - 2429817 | 31866.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





