Escherichia coli strain Broiler parent90

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Broiler parent90 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. It is a facultative anaerobe, thriving optimally at a temperature of 37°C within a mesophilic range. The strain is characterized by a cell arrangement of pairs and singles and possesses two membranes, indicating its complex cellular structure. This strain is classified as free-living and is associated with a wide range of hosts, including humans (Homo sapiens), various species of birds (Aves), mammals such as cattle (Bos taurus), pigs (Sus scrofa), and numerous other vertebrates and invertebrates. Its diverse host range suggests an adaptability that may contribute to its persistence in various ecological niches. E. coli strain Broiler parent90 is linked to numerous health effects, particularly in humans. It is known to cause urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The presence of this strain in food systems can lead to foodborne infections, emphasizing its role in public health challenges like food poisoning. The broad pathogenicity profile highlights the strain's potential impact on human health, as it is implicated in both acute and chronic diseases, including renal failure and colorectal cancer. This underscores the importance of understanding such strains not only in clinical settings but also in relation to their ecological interactions and transmission pathways within diverse host species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Broiler parent90

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Broiler parent90
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Broiler parent90

Gene Summary

Adenine Count

1277852 bp

Thymine Count

1283400 bp

Guanine Count

1316401 bp

Cytosine Count

1301680 bp

Genome Length

5179683 bp

Protein-coding Genes

4775 genes

Non-Coding Genes

241 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-thrNot AvailableNot AvailablePositive3829932 - 3830007Not Available
Trna-glyNot AvailableNot AvailablePositive3830014 - 3830088Not Available
Trna-tyrNot AvailableNot AvailablePositive3830205 - 3830289Not Available
Trna-thrNot AvailableNot AvailablePositive3830298 - 3830373Not Available
type i pantothenate kinaseEYY10_19135Not AvailablePositive3830735 - 383168536361.8
bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor biraEYY10_19140Not AvailableNegative3831714 - 383267935303.1
udp-n-acetylmuramate dehydrogenaseEYY10_19145Not AvailableNegative3832676 - 383370437948.4
phage tail tape measure proteinEYY10_19150Not AvailableNegative3833905 - 383554758145.5
gpe family phage tail proteinEYY10_19155Not AvailableNegative3835540 - 38356594560.46
phage tail assembly proteinEYY10_19160Not AvailableNegative3835692 - 38359679637.89

Displaying genes 3741 – 3750 of 5016 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total