Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber assembly protein | EYY09_16910 | Not Available | Positive | 3393773 - 3394375 | 21648.9 |
| Tail fiber assembly protein | EYY09_16915 | Not Available | Negative | 3394347 - 3394790 | 16562.4 |
| Tail protein | EYY09_16920 | Not Available | Negative | 3394811 - 3396232 | 50039.6 |
| Tail fibers protein | EYY09_16925 | Not Available | Negative | 3396229 - 3396840 | 22521.8 |
| Baseplate assembly protein j | EYY09_16930 | Not Available | Negative | 3396833 - 3397741 | 32808.8 |
| Baseplate protein | EYY09_16935 | Not Available | Negative | 3397746 - 3398726 | 34777.6 |
| Tail completion protein | EYY09_16940 | Not Available | Negative | 3398793 - 3399245 | 17227.9 |
| Tail protein | EYY09_16945 | Not Available | Negative | 3399238 - 3399502 | 9806.51 |
| Attl | Not Available | Not Available | Positive | 3647209 - 3647223 | Not Available |
| Putative integrase | EYY09_18220 | Not Available | Positive | 3649226 - 3650653 | 53301.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





