Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY09_24055 | Not Available | Negative | 4801785 - 4802126 | 12523.9 |
| xylulokinase | EYY09_24060 | Not Available | Negative | 4802295 - 4803749 | 52671.4 |
| xylose isomerase | EYY09_24065 | Not Available | Negative | 4803820 - 4805142 | 49721.7 |
| d-xylose abc transporter substrate-binding protein | EYY09_24070 | Not Available | Positive | 4805508 - 4806500 | 35752.2 |
| d-xylose abc transporter atp-binding protein | EYY09_24075 | Not Available | Positive | 4806578 - 4808119 | 56488.0 |
| xylose abc transporter permease xylh | EYY09_24080 | Not Available | Positive | 4808097 - 4809278 | 41033.5 |
| xylr family transcriptional regulator | EYY09_24085 | Not Available | Positive | 4809356 - 4810534 | 44871.7 |
| protein bax | EYY09_24090 | Not Available | Negative | 4810642 - 4811466 | 30869.3 |
| alpha-amylase | EYY09_24095 | Not Available | Positive | 4811786 - 4813816 | 75739.4 |
| valine--pyruvate transaminase | EYY09_24100 | Not Available | Positive | 4813994 - 4815247 | 46715.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





