Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | EYY09_21675 | Not Available | Positive | 4324096 - 4325478 | 49504.5 |
| dihydromonapterin reductase | EYY09_21680 | Not Available | Positive | 4325515 - 4326237 | 26349.9 |
| glpm family protein | EYY09_21685 | Not Available | Negative | 4326234 - 4326569 | 12295.8 |
| two-component system response regulator rsta | EYY09_21690 | Not Available | Positive | 4326698 - 4327417 | 26689.4 |
| two-component system sensor histidine kinase rstb | EYY09_21695 | Not Available | Positive | 4327421 - 4328722 | 49230.7 |
| dna replication terminus site-binding protein | EYY09_21700 | Not Available | Positive | 4328798 - 4329727 | 35825.2 |
| class ii fumarate hydratase | EYY09_21705 | Not Available | Negative | 4329724 - 4331127 | 50434.8 |
| fumarate hydratase | EYY09_21710 | Not Available | Negative | 4331270 - 4332916 | 60248.9 |
| mannose-6-phosphate isomerase | EYY09_21715 | Not Available | Positive | 4333115 - 4334290 | 42768.3 |
| duf945 domain-containing protein | EYY09_21720 | Not Available | Positive | 4334391 - 4335899 | 54668.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





