Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-siderophore abc transporter substrate-binding protein | EYY09_18510 | Not Available | Positive | 3705606 - 3706553 | 34477.7 |
| murr/rpir family transcriptional regulator | EYY09_18515 | Not Available | Positive | 3706550 - 3707437 | 32250.4 |
| antibiotic biosynthesis monooxygenase | EYY09_18520 | Not Available | Negative | 3707482 - 3707796 | 11533.1 |
| nadph:quinone oxidoreductase mdab | EYY09_18525 | Not Available | Negative | 3707827 - 3708408 | 21892.1 |
| duf2645 family protein | EYY09_18535 | Not Available | Positive | 3709858 - 3710190 | 13244.7 |
| two-component system sensor histidine kinase qsec | EYY09_18540 | Not Available | Negative | 3710236 - 3711585 | 50275.7 |
| two-component system response regulator qseb | EYY09_18545 | Not Available | Negative | 3711582 - 3712241 | 24689.2 |
| ob fold stress tolerance protein ygiw | EYY09_18550 | Not Available | Positive | 3712393 - 3712785 | 14011.5 |
| transcriptional regulator | EYY09_18555 | Not Available | Positive | 3712838 - 3713320 | 17916.4 |
| abc transporter substrate-binding protein | EYY09_18560 | Not Available | Positive | 3713429 - 3715036 | 60700.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





