Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | EYY09_17840 | Not Available | Positive | 3571975 - 3572610 | 23225.4 |
| permease | EYY09_17845 | Not Available | Positive | 3572683 - 3573723 | 37223.9 |
| divisome-associated lipoprotein yrap | EYY09_17850 | Not Available | Negative | 3573836 - 3574411 | 20029.1 |
| dnaa initiator-associating protein diaa | EYY09_17855 | Not Available | Negative | 3574421 - 3575011 | 21091.4 |
| yran family protein | EYY09_17860 | Not Available | Negative | 3575031 - 3575426 | 14798.5 |
| penicillin-binding protein activator | EYY09_17865 | Not Available | Negative | 3575384 - 3577420 | 72736.2 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | EYY09_17870 | Not Available | Positive | 3577485 - 3578348 | 31464.8 |
| galactosamine-6-phosphate isomerase | EYY09_17875 | Not Available | Negative | 3578398 - 3579165 | 28393.2 |
| pts n-acetylgalactosamine transporter subunit iid | EYY09_17880 | Not Available | Negative | 3579166 - 3579957 | 28976.1 |
| n-acetylgalactosamine permease iic component 1 | EYY09_17885 | Not Available | Negative | 3579947 - 3580750 | 28646.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





