Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate utilization protein c | EYY09_17170 | Not Available | Positive | 3437518 - 3438213 | 25110.1 |
| hypothetical protein | EYY09_17175 | Not Available | Negative | 3438456 - 3439124 | 25483.1 |
| autotransporter outer membrane beta-barrel domain-containing protein | EYY09_17180 | Not Available | Negative | 3439308 - 3440501 | 41773.2 |
| protein sbma | EYY09_17185 | Not Available | Positive | 3440579 - 3440688 | 4440.47 |
| hypothetical protein | EYY09_17190 | Not Available | Positive | 3440872 - 3441318 | 16154.8 |
| hypothetical protein | EYY09_17195 | Not Available | Negative | 3441414 - 3441671 | 9620.55 |
| hypothetical protein | EYY09_17200 | Not Available | Positive | 3442400 - 3442612 | 7360.01 |
| lasso peptide microcin j25 | EYY09_17205 | Not Available | Negative | 3443739 - 3443915 | 6200.57 |
| lasso peptide biosynthesis b2 protein | EYY09_17210 | Not Available | Positive | 3444255 - 3444881 | 24569.7 |
| lasso peptide isopeptide bond-forming cyclase | EYY09_17215 | Not Available | Positive | 3444884 - 3446425 | 58710.4 |
Pathways
565 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





