Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system toxin ccdb | EYY09_16960 | Not Available | Negative | 3401261 - 3401566 | 11693.2 |
| type ii toxin-antitoxin system antitoxin ccda | EYY09_16965 | Not Available | Negative | 3401568 - 3401786 | 8354.72 |
| hypothetical protein | EYY09_16970 | Not Available | Positive | 3401788 - 3402066 | 10482.5 |
| hypothetical protein | EYY09_16975 | Not Available | Negative | 3402031 - 3402216 | 6363.54 |
| helix-turn-helix domain-containing protein | EYY09_16980 | Not Available | Positive | 3402342 - 3403031 | 25665.5 |
| res domain-containing protein | EYY09_16985 | Not Available | Negative | 3403063 - 3403752 | 25083.6 |
| toxin-antitoxin system, antitoxin component, abrb family protein | EYY09_16990 | Not Available | Positive | 3404056 - 3404193 | 5157.26 |
| abrb/maze/spovt family dna-binding domain-containing protein | EYY09_16995 | Not Available | Positive | 3404171 - 3404401 | 8816.38 |
| type ii toxin-antitoxin system vapc family toxin | EYY09_17000 | Not Available | Positive | 3404398 - 3404814 | 15230.6 |
| aaa family atpase | EYY09_17005 | Not Available | Negative | 3404976 - 3407114 | 81007.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





