Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| resolvase | EYY09_16820 | Not Available | Positive | 3378911 - 3379126 | 8363.03 |
| hsdr | EYY09_16825 | Not Available | Positive | 3379163 - 3380263 | 42196.7 |
| hypothetical protein | EYY09_16830 | Not Available | Positive | 3380485 - 3380919 | 15731.0 |
| dgtpase | EYY09_16835 | Not Available | Positive | 3381137 - 3383521 | 89758.6 |
| chemotaxis protein | EYY09_16840 | Not Available | Positive | 3383518 - 3384423 | 33845.9 |
| patatin-like phospholipase family protein | EYY09_16845 | Not Available | Positive | 3384420 - 3385490 | 38405.5 |
| hypothetical protein | EYY09_16850 | Not Available | Positive | 3385626 - 3386303 | 24919.0 |
| hypothetical protein | EYY09_16855 | Not Available | Positive | 3386319 - 3386729 | 15097.3 |
| duf945 domain-containing protein | EYY09_16865 | Not Available | Positive | 3386950 - 3387507 | 21193.4 |
| phage integrase family protein | EYY09_16955 | Not Available | Negative | 3400478 - 3401260 | 28853.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





