Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY09_16660 | Not Available | Positive | 3351133 - 3351399 | 10514.9 |
| rpn family recombination-promoting nuclease/putative transposase | EYY09_16665 | Not Available | Positive | 3351464 - 3352417 | 36328.9 |
| hypothetical protein | EYY09_16670 | Not Available | Positive | 3352479 - 3352697 | 8167.68 |
| helix-turn-helix transcriptional regulator | EYY09_16675 | Not Available | Negative | 3352728 - 3352979 | 9909.82 |
| hypothetical protein | EYY09_16680 | Not Available | Negative | 3353013 - 3353210 | 7346.11 |
| hypothetical protein | EYY09_16685 | Not Available | Positive | 3353219 - 3353434 | 7685.21 |
| duf4942 domain-containing protein | EYY09_16690 | Not Available | Positive | 3353559 - 3354407 | 32197.6 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | EYY09_16695 | Not Available | Negative | 3354493 - 3354828 | 12490.8 |
| nika protein | EYY09_16700 | Not Available | Positive | 3355062 - 3355394 | 12642.4 |
| relaxase nikb | EYY09_16705 | Not Available | Positive | 3355405 - 3358104 | 104137.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





