Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpa family transcriptional regulator | EYY09_16540 | Not Available | Positive | 3333091 - 3333297 | 7805.57 |
| hypothetical protein | EYY09_16545 | Not Available | Positive | 3333391 - 3333829 | 17061.7 |
| s-layer family protein | EYY09_16550 | Not Available | Negative | 3333830 - 3336283 | 81665.5 |
| phenylacetic acid degradation protein paay | EYY09_16555 | Not Available | Negative | 3336712 - 3336903 | 6790.4 |
| duf1318 domain-containing protein | EYY09_16565 | Not Available | Negative | 3337361 - 3337687 | 11994.5 |
| ynbe family lipoprotein | EYY09_16570 | Not Available | Negative | 3337695 - 3337880 | 6840.53 |
| ydbh family protein | EYY09_16575 | Not Available | Negative | 3337877 - 3340516 | 96772.1 |
| d-lactate dehydrogenase | EYY09_16580 | Not Available | Positive | 3340724 - 3341713 | 36522.8 |
| heat shock protein hslj | EYY09_16585 | Not Available | Positive | 3341824 - 3342246 | 15105.5 |
| duf333 domain-containing protein | EYY09_16590 | Not Available | Negative | 3342243 - 3342509 | 8765.56 |
Pathways
932 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





