Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate transporter pgtp | EYY09_16435 | Not Available | Positive | 3319558 - 3320922 | 50215.6 |
| hypothetical protein | EYY09_16440 | Not Available | Positive | 3320965 - 3321330 | 14451.2 |
| duf4432 domain-containing protein | EYY09_16450 | Not Available | Negative | 3321871 - 3322884 | 38082.5 |
| l-fucose:h+ symporter permease | EYY09_16455 | Not Available | Negative | 3322896 - 3324212 | 48477.2 |
| ribokinase | EYY09_16460 | Not Available | Negative | 3324240 - 3325160 | 33223.8 |
| deor family transcriptional regulator | EYY09_16465 | Not Available | Positive | 3325464 - 3326246 | 29113.3 |
| acetolactate synthase | EYY09_16470 | Not Available | Negative | 3326248 - 3326346 | 3853.71 |
| hypothetical protein | EYY09_16475 | Not Available | Negative | 3326474 - 3326674 | 7392.88 |
| hypothetical protein | EYY09_16480 | Not Available | Positive | 3327028 - 3327267 | 9173.61 |
| hypothetical protein | EYY09_16485 | Not Available | Negative | 3327394 - 3327588 | 6985.17 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





