Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | EYY09_16380 | Not Available | Negative | 3306897 - 3307415 | 18733.3 |
| nuclease pin | EYY09_16385 | Not Available | Negative | 3307499 - 3308062 | 20818.7 |
| molecular chaperone | EYY09_16390 | Not Available | Negative | 3308099 - 3308830 | 26879.6 |
| papc/fimd family outer membrane usher protein | EYY09_16395 | Not Available | Negative | 3308899 - 3311358 | 90505.3 |
| type 1 fimbrial protein | EYY09_16400 | Not Available | Negative | 3311530 - 3312117 | 21855.3 |
| type 1 fimbrial protein | EYY09_16405 | Not Available | Negative | 3312203 - 3312709 | 17242.2 |
| transcriptional regulator | EYY09_16410 | Not Available | Negative | 3312754 - 3313011 | 9761.8 |
| two-component system response regulator pgta | EYY09_16420 | Not Available | Negative | 3314699 - 3315946 | 47457.4 |
| two-component system sensor histidine kinase pgtb | EYY09_16425 | Not Available | Negative | 3315936 - 3317945 | 75954.9 |
| phosphoglycerate transport regulator pgtc | EYY09_16430 | Not Available | Negative | 3317942 - 3319159 | 45228.8 |
Pathways
940 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





