Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar porter family mfs transporter | EYY09_16215 | Not Available | Positive | 3276770 - 3278164 | 50985.6 |
| sprt family zinc-dependent metalloprotease | EYY09_16220 | Not Available | Positive | 3278241 - 3278738 | 19322.6 |
| deoxyribonuclease i | EYY09_16225 | Not Available | Positive | 3278833 - 3279540 | 26739.5 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | EYY09_16230 | Not Available | Positive | 3279620 - 3280351 | 27035.8 |
| glutathione synthase | EYY09_16235 | Not Available | Positive | 3280364 - 3281314 | 35615.0 |
| yqge/algh family protein | EYY09_16240 | Not Available | Positive | 3281423 - 3281986 | 20687.1 |
| holliday junction resolvase ruvx | EYY09_16245 | Not Available | Positive | 3281986 - 3282402 | 15187.2 |
| type iv pilus twitching motility protein pilt | EYY09_16250 | Not Available | Negative | 3282576 - 3283556 | 35988.4 |
| pyridoxal phosphate homeostasis protein | EYY09_16255 | Not Available | Positive | 3283574 - 3284278 | 25761.9 |
| osmotic shock tolerance protein yggt | EYY09_16260 | Not Available | Positive | 3284296 - 3284862 | 21168.5 |
Pathways
341 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





