Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY09_16005 | Not Available | Positive | 3238789 - 3238872 | 3217.06 |
| fad-dependent 2-octaprenylphenol hydroxylase | EYY09_16010 | Not Available | Negative | 3238946 - 3240148 | 44202.4 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | EYY09_16015 | Not Available | Negative | 3240171 - 3241349 | 42516.1 |
| xaa-pro aminopeptidase | EYY09_16020 | Not Available | Negative | 3241346 - 3242671 | 49785.1 |
| upf0149 family protein ygfb | EYY09_16025 | Not Available | Negative | 3242697 - 3243275 | 21230.8 |
| cell division protein zapa | EYY09_16030 | Not Available | Positive | 3243443 - 3243772 | 12594.9 |
| 5-formyltetrahydrofolate cyclo-ligase | EYY09_16040 | Not Available | Positive | 3244018 - 3244620 | 23244.4 |
| type i toxin-antitoxin system toxin ibsc | EYY09_16045 | Not Available | Negative | 3244721 - 3244780 | 2209.04 |
| d-3-phosphoglycerate dehydrogenase | EYY09_16050 | Not Available | Negative | 3245009 - 3246241 | 44178.4 |
| ribose-5-phosphate isomerase rpia | EYY09_16055 | Not Available | Negative | 3246497 - 3247156 | 22861.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





