Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | EYY09_15600 | Not Available | Positive | 3140219 - 3140755 | 20531.0 |
| type vi secretion system baseplate subunit tsse | EYY09_15605 | Not Available | Positive | 3140759 - 3141187 | 16345.9 |
| type vi secretion system protein vasl | EYY09_15610 | Not Available | Positive | 3141187 - 3142563 | 51935.5 |
| phosphoglycerate dehydrogenase | EYY09_15615 | Not Available | Negative | 3142863 - 3143810 | 34341.7 |
| sis domain-containing protein | EYY09_15620 | Not Available | Negative | 3143882 - 3144478 | 20884.3 |
| putative c-s lyase | EYY09_15625 | Not Available | Negative | 3144481 - 3145665 | 45208.0 |
| pts glucose transporter subunit iibc | EYY09_15630 | Not Available | Negative | 3145665 - 3147245 | 57668.2 |
| prd domain-containing protein | EYY09_15635 | Not Available | Negative | 3147277 - 3148101 | 31967.7 |
| amin domain-containing protein | EYY09_15640 | Not Available | Negative | 3148359 - 3149612 | 45637.1 |
| amino-acid n-acetyltransferase | EYY09_15645 | Not Available | Positive | 3149844 - 3151175 | 49228.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





