Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | EYY09_15550 | Not Available | Positive | 3127597 - 3128199 | 23310.9 |
| hypothetical protein | EYY09_15555 | Not Available | Positive | 3128201 - 3128752 | 20696.2 |
| hypothetical protein | EYY09_15560 | Not Available | Positive | 3128830 - 3130044 | 44697.8 |
| type vi secretion protein vask | EYY09_15565 | Not Available | Positive | 3130101 - 3133433 | 124107.0 |
| type vi secretion system protein tssa | EYY09_15570 | Not Available | Positive | 3133426 - 3135036 | 59974.0 |
| paar domain-containing protein | EYY09_15575 | Not Available | Positive | 3135042 - 3136460 | 52358.6 |
| hypothetical protein | EYY09_15580 | Not Available | Positive | 3136453 - 3136875 | 15949.1 |
| hypothetical protein | EYY09_15585 | Not Available | Positive | 3136955 - 3137359 | 14893.8 |
| type vi secretion system baseplate subunit tssf | EYY09_15590 | Not Available | Positive | 3137435 - 3139195 | 67233.3 |
| type vi secretion system baseplate subunit tssg | EYY09_15595 | Not Available | Positive | 3139159 - 3140238 | 39436.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





