Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide 5'-monophosphate nucleosidase | EYY09_15400 | Not Available | Positive | 3094002 - 3095366 | 50975.0 |
| haaap family serine/threonine permease | EYY09_15405 | Not Available | Positive | 3095923 - 3097212 | 46923.3 |
| l-serine ammonia-lyase | EYY09_15410 | Not Available | Positive | 3097270 - 3098637 | 48725.8 |
| flap endonuclease xni | EYY09_15415 | Not Available | Positive | 3098749 - 3099504 | 28136.7 |
| lactaldehyde reductase | EYY09_15420 | Not Available | Negative | 3099609 - 3100757 | 40631.8 |
| l-fuculose-phosphate aldolase | EYY09_15425 | Not Available | Negative | 3100785 - 3101432 | 23758.7 |
| l-fucose:h+ symporter permease | EYY09_15430 | Not Available | Positive | 3101979 - 3103295 | 47581.6 |
| l-fucose isomerase | EYY09_15435 | Not Available | Positive | 3103328 - 3105103 | 64993.4 |
| l-fuculokinase | EYY09_15440 | Not Available | Positive | 3105212 - 3106630 | 52307.7 |
| l-fucose mutarotase | EYY09_15445 | Not Available | Positive | 3106632 - 3107054 | 15474.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





