Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EYY09_15350 | Not Available | Negative | 3081395 - 3082696 | 48045.0 |
| two-component sensor histidine kinase bara | EYY09_15355 | Not Available | Positive | 3082753 - 3085509 | 102505.0 |
| glucarate dehydratase | EYY09_15360 | Not Available | Negative | 3085740 - 3087080 | 49123.9 |
| glucarate dehydratase | EYY09_15365 | Not Available | Negative | 3087101 - 3088441 | 48838.4 |
| mfs transporter | EYY09_15370 | Not Available | Negative | 3088443 - 3089795 | 49145.0 |
| flavodoxin | EYY09_15375 | Not Available | Negative | 3090229 - 3090678 | 16316.2 |
| trna pseudouridine(65) synthase truc | EYY09_15380 | Not Available | Negative | 3090696 - 3091478 | 29637.4 |
| yqcc family protein | EYY09_15385 | Not Available | Negative | 3091478 - 3091807 | 12773.2 |
| secy-interacting protein | EYY09_15390 | Not Available | Negative | 3092429 - 3092974 | 20737.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EYY09_15395 | Not Available | Positive | 3093042 - 3093890 | 32573.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





