Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin family protein | EYY09_15140 | Not Available | Positive | 3038232 - 3038783 | 19593.0 |
| rna polymerase sigma factor rpos | EYY09_15145 | Not Available | Negative | 3038954 - 3039946 | 37975.1 |
| murein hydrolase activator nlpd | EYY09_15150 | Not Available | Negative | 3040009 - 3041148 | 40179.3 |
| protein-l-isoaspartate o-methyltransferase | EYY09_15155 | Not Available | Negative | 3041288 - 3041914 | 23259.2 |
| 5'/3'-nucleotidase sure | EYY09_15160 | Not Available | Negative | 3041908 - 3042669 | 26902.0 |
| trna pseudouridine(13) synthase trud | EYY09_15165 | Not Available | Negative | 3042650 - 3043699 | 39182.8 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EYY09_15170 | Not Available | Negative | 3043696 - 3044175 | 16868.5 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EYY09_15175 | Not Available | Negative | 3044175 - 3044885 | 25780.8 |
| cell division protein ftsb | EYY09_15180 | Not Available | Negative | 3044904 - 3045215 | 11621.8 |
| duf3561 family protein | EYY09_15185 | Not Available | Negative | 3045408 - 3045731 | 11863.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





