Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 3 | EYY09_15035 | Not Available | Negative | 3017305 - 3019131 | 64129.2 |
| 4fe-4s dicluster domain-containing protein | EYY09_15040 | Not Available | Negative | 3019128 - 3019739 | 21906.4 |
| formate hydrogenlyase regulator hyca | EYY09_15045 | Not Available | Negative | 3019864 - 3020325 | 17656.0 |
| hypothetical protein | EYY09_15050 | Not Available | Negative | 3020413 - 3020631 | 8011.78 |
| hydrogenase maturation nickel metallochaperone hypa | EYY09_15055 | Not Available | Positive | 3020537 - 3020887 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | EYY09_15060 | Not Available | Positive | 3020891 - 3021763 | 31566.8 |
| hydrogenase 3 maturation protein hypc | EYY09_15065 | Not Available | Positive | 3021754 - 3022026 | 9732.58 |
| hydrogenase formation protein hypd | EYY09_15070 | Not Available | Positive | 3022026 - 3023147 | 41366.7 |
| hydrogenase maturation carbamoyl dehydratase hype | EYY09_15075 | Not Available | Positive | 3023144 - 3024154 | 35036.5 |
| formate hydrogenlyase transcriptional activator flha | EYY09_15080 | Not Available | Positive | 3024228 - 3026306 | 78456.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





