Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport protein hydn | EYY09_14980 | Not Available | Negative | 3010327 - 3010854 | 19027.2 |
| hypothetical protein | EYY09_14990 | Not Available | Positive | 3011282 - 3011719 | 16611.5 |
| helix-turn-helix domain-containing protein | EYY09_14995 | Not Available | Negative | 3011811 - 3012230 | 15417.2 |
| hypothetical protein | EYY09_15000 | Not Available | Negative | 3012256 - 3012441 | 6940.52 |
| hydrogenase maturation peptidase hyci | EYY09_15005 | Not Available | Negative | 3012466 - 3012933 | 16884.4 |
| formate hydrogenlyase maturation protein hych | EYY09_15010 | Not Available | Negative | 3012926 - 3013336 | 15451.5 |
| formate hydrogenlyase subunit hycg | EYY09_15015 | Not Available | Negative | 3013333 - 3014100 | 28025.8 |
| formate hydrogenlyase subunit hycf | EYY09_15020 | Not Available | Negative | 3014100 - 3014642 | 20328.4 |
| hydrogenase large subunit | EYY09_15025 | Not Available | Negative | 3014652 - 3016361 | 64970.1 |
| formate hydrogenlyase subunit hycd | EYY09_15030 | Not Available | Negative | 3016379 - 3017302 | 33059.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





