Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 2990810 - 2990886 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 2990890 - 2990982 | Not Available |
| carbon storage regulator csra | EYY09_14890 | Not Available | Negative | 2991298 - 2991483 | 6856.34 |
| alanine--trna ligase | EYY09_14895 | Not Available | Negative | 2991718 - 2994348 | 96009.8 |
| recombination regulator recx | EYY09_14900 | Not Available | Negative | 2994477 - 2994977 | 19358.0 |
| recombinase reca | EYY09_14905 | Not Available | Negative | 2995046 - 2996107 | 37975.6 |
| nicotinamide-nucleotide amidase | EYY09_14910 | Not Available | Negative | 2996187 - 2996684 | 17581.7 |
| hypothetical protein | EYY09_14915 | Not Available | Positive | 2996866 - 2997105 | 8681.87 |
| lytic murein transglycosylase b | EYY09_14920 | Not Available | Negative | 2997144 - 2998229 | 40290.0 |
| pts glucitol/sorbitol transporter subunit iic | EYY09_14925 | Not Available | Positive | 2998486 - 2999049 | 20600.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





