Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2'-5' rna ligase | EYY09_14830 | Not Available | Positive | 2984836 - 2985543 | 27861.4 |
| poly(a) polymerase | EYY09_14835 | Not Available | Positive | 2985540 - 2986652 | 43146.8 |
| s-ribosylhomocysteine lyase | EYY09_14840 | Not Available | Negative | 2986703 - 2987218 | 19444.4 |
| glutamate--cysteine ligase | EYY09_14845 | Not Available | Negative | 2987368 - 2988924 | 58272.5 |
| deda family protein | EYY09_14850 | Not Available | Negative | 2988997 - 2989425 | 15576.6 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | EYY09_14855 | Not Available | Negative | 2989422 - 2989988 | 20800.1 |
| Trna-arg | Not Available | Not Available | Positive | 2990269 - 2990345 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2990409 - 2990485 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2990548 - 2990624 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2990669 - 2990745 | Not Available |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





