Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimm | EYY09_14625 | Not Available | Negative | 2948248 - 2948796 | 20606.6 |
| 30s ribosomal protein s16 | EYY09_14630 | Not Available | Negative | 2948815 - 2949063 | 9191.08 |
| signal recognition particle protein | EYY09_14635 | Not Available | Negative | 2949200 - 2950561 | 49790.5 |
| inner membrane protein ypjd | EYY09_14640 | Not Available | Positive | 2950728 - 2951519 | 29312.0 |
| duf21 domain-containing protein | EYY09_14645 | Not Available | Positive | 2951540 - 2952826 | 48047.2 |
| nucleotide exchange factor grpe | EYY09_14650 | Not Available | Negative | 2952880 - 2953473 | 21813.1 |
| nad(+) kinase | EYY09_14655 | Not Available | Positive | 2953596 - 2954474 | 32583.3 |
| dna repair protein recn | EYY09_14660 | Not Available | Positive | 2954560 - 2956221 | 61458.1 |
| outer membrane protein assembly factor bame | EYY09_14665 | Not Available | Positive | 2956370 - 2956711 | 12302.8 |
| rnfh family protein | EYY09_14670 | Not Available | Negative | 2956773 - 2957063 | 10816.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





