Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | EYY09_14185 | Not Available | Negative | 2879943 - 2880062 | 4676.72 |
| hypothetical protein | EYY09_14205 | Not Available | Negative | 2881288 - 2881629 | 12587.0 |
| cysteine hydrolase | EYY09_14215 | Not Available | Positive | 2882576 - 2883244 | 24120.3 |
| duf2877 domain-containing protein | EYY09_14220 | Not Available | Positive | 2883250 - 2884110 | 31999.6 |
| pili assembly chaperone | EYY09_14225 | Not Available | Negative | 2884452 - 2884904 | 17620.4 |
| pilus assembly protein | EYY09_14230 | Not Available | Negative | 2884947 - 2885201 | 9954.02 |
| hypothetical protein | EYY09_14240 | Not Available | Negative | 2885365 - 2885916 | 19774.6 |
| conjugal transfer protein trac | EYY09_14245 | Not Available | Negative | 2886089 - 2886772 | 25925.3 |
| transcription termination factor nusg | EYY09_14250 | Not Available | Negative | 2887025 - 2887558 | 20741.0 |
| conjugal transfer protein traa | EYY09_14255 | Not Available | Negative | 2887564 - 2887686 | 4613.55 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





