Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn3-like element tnas1 family transposase | EYY09_14125 | Not Available | Positive | 2870453 - 2873419 | 111673.0 |
| hypothetical protein | EYY09_14130 | Not Available | Negative | 2873396 - 2873593 | 7621.06 |
| recombinase family protein | EYY09_14135 | Not Available | Positive | 2873636 - 2874226 | 22005.6 |
| abc transporter substrate-binding protein | EYY09_14145 | Not Available | Positive | 2874581 - 2875579 | 36377.7 |
| iron abc transporter permease | EYY09_14150 | Not Available | Positive | 2875579 - 2876616 | 35604.3 |
| abc transporter atp-binding protein | EYY09_14155 | Not Available | Positive | 2876616 - 2877377 | 28026.2 |
| mfs transporter | EYY09_14160 | Not Available | Positive | 2877389 - 2878621 | 43284.3 |
| bacteriocin immunity protein | EYY09_14165 | Not Available | Negative | 2878699 - 2878956 | 9925.44 |
| hnh endonuclease | EYY09_14170 | Not Available | Negative | 2878957 - 2879190 | 8916.71 |
| hypothetical protein | EYY09_14180 | Not Available | Negative | 2879709 - 2879897 | 7263.66 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





