Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin export transporter peptidase/atp-binding subunit mchf | EYY09_13845 | Not Available | Negative | 2816048 - 2818168 | 78935.1 |
| hlyd family secretion protein | EYY09_13850 | Not Available | Negative | 2818143 - 2819384 | 47376.9 |
| toxin-activating lysine-acyltransferase | EYY09_13855 | Not Available | Negative | 2819570 - 2820022 | 18168.8 |
| mchc protein | EYY09_13860 | Not Available | Negative | 2820048 - 2821598 | 58498.4 |
| microcin h47 | EYY09_13865 | Not Available | Negative | 2821870 - 2822097 | 6600.75 |
| microcin immunity protein | EYY09_13870 | Not Available | Negative | 2822125 - 2822334 | 7815.88 |
| hypothetical protein | EYY09_13875 | Not Available | Positive | 2822443 - 2822679 | 8905.85 |
| hypothetical protein | EYY09_13880 | Not Available | Positive | 2822747 - 2822992 | 9149.42 |
| hypothetical protein | EYY09_13885 | Not Available | Positive | 2823268 - 2823582 | 11989.3 |
| hypothetical protein | EYY09_13890 | Not Available | Positive | 2823599 - 2823832 | 7950.32 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





