Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY09_13650 | Not Available | Negative | 2780120 - 2780201 | 3010.62 |
| is1 family transposase | EYY09_13655 | Not Available | Positive | 2780202 - 2780379 | 6959.57 |
| repb family plasmid replication initiator protein | EYY09_13680 | Not Available | Positive | 2782308 - 2783285 | 37317.0 |
| site-specific integrase | EYY09_13685 | Not Available | Negative | 2783570 - 2784310 | 28221.5 |
| serine/threonine protein kinase | EYY09_13690 | Not Available | Negative | 2784431 - 2784619 | 7268.76 |
| antimicrobial resistance protein mig-14 | EYY09_13695 | Not Available | Negative | 2784994 - 2785896 | 35089.6 |
| nad-dependent epimerase/dehydratase family protein | EYY09_13700 | Not Available | Negative | 2785965 - 2787074 | 41008.3 |
| hypothetical protein | EYY09_13705 | Not Available | Positive | 2787133 - 2787417 | 11160.0 |
| omptin family outer membrane protease | EYY09_13710 | Not Available | Negative | 2787507 - 2788460 | 35592.3 |
| glcnac transferase | EYY09_13715 | Not Available | Positive | 2788564 - 2788953 | 14183.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





