Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethyl sulfoxide reductase anchor subunit | EYY09_13480 | Not Available | Positive | 2749614 - 2750477 | 30827.2 |
| hydrolase | EYY09_13485 | Not Available | Negative | 2750513 - 2751139 | 23089.5 |
| mfs transporter | EYY09_13490 | Not Available | Positive | 2751453 - 2752601 | 41506.3 |
| pyruvate formate lyase 1-activating protein | EYY09_13495 | Not Available | Negative | 2752698 - 2753495 | 30100.0 |
| site-specific integrase | EYY09_13500 | Not Available | Negative | 2753527 - 2754522 | 37948.1 |
| helix-turn-helix transcriptional regulator | EYY09_13505 | Not Available | Negative | 2754616 - 2754915 | 11437.6 |
| hypothetical protein | EYY09_13510 | Not Available | Positive | 2755024 - 2755380 | 13473.9 |
| replication protein b | EYY09_13515 | Not Available | Positive | 2755558 - 2756058 | 20070.3 |
| is3 family transposase | EYY09_13520 | Not Available | Negative | 2756110 - 2756283 | 6531.26 |
| increased serum survival lipoprotein iss | EYY09_13525 | Not Available | Positive | 2756945 - 2757238 | 10448.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





